Mouse Developmental Methylome Database
To facilitate further analysis of mouse developmental methylomes, DevMouse provides download links to all the available data in this database. The data provided in the download page include the normalized DNA methylation data by us, and the links for corresponding raw data in public data resources such as Gene Expression Omnibus (GEO) and DNA Data Bank of Japan (DDBJ). The detailed description of following data table can be found in Tutorial.
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Methylome | Technology | Cell/Tissue | Period | Sex | Author | ExternalGEOID | LocalLink |
---|---|---|---|---|---|---|---|
Smith_GSE34864_RRBS_Zygote_mm9 | RRBS | Zygote | Zygote | unknown | Zachary D. Smith et al. | GSE34864 | DownLoad |
Smith_GSE34864_RRBS_2Cell_mm9 | RRBS | 2Cell | 2Cell | cell | Zachary D. Smith et al. | GSE34864 | DownLoad |
Smith_GSE34864_RRBS_4Cell_mm9 | RRBS | 4Cell | 4Cell | cell | Zachary D. Smith et al. | GSE34864 | DownLoad |
Smith_GSE34864_RRBS_8Cell_mm9 | RRBS | 8Cell | 8Cell | cell | Zachary D. Smith et al. | GSE34864 | DownLoad |
Meissner_GSE11034_RRBS_E3.5_ESC_mm9 | RRBS | ESC | E3.5 | cell | Alexander Meissner et al. | GSE11034 | DownLoad |
Smith_GSE34864_RRBS_E3.5_ESC_mm9 | RRBS | ESC | E3.5 | unknown | Zachary D. Smith et al. | GSE34864 | DownLoad |
Stadler_GSE30202_BSSeq_E3.5_ESC_mm9 | BS-Seq | ESC | E3.5 | unknown | Michael B. Stadler et al. | GSE30202 | DownLoad |
Smith_GSE34864_RRBS_E6.5_mm9 | RRBS | E6.5 | E6.5 | unknown | Zachary D. Smith et al. | GSE34864 | DownLoad |
Smith_GSE34864_RRBS_E7.5_mm9 | RRBS | E7.5 | E7.5 | unknown | Zachary D. Smith et al. | GSE34864 | DownLoad |
Kobayashi_DRA000607_BSSeq_E10.5_PGCfemale_mm9 | BS-Seq | PGC | E10.5 | female | Hisato Kobayashi et al. | DRA000607 | DownLoad |
Kobayashi_DRA000607_BSSeq_E10.5_PGCmale_mm9 | BS-Seq | PGC | E10.5 | male | Hisato Kobayashi et al. | DRA000607 | DownLoad |
Kobayashi_DRA000607_BSSeq_E13.5_PGCfemale_mm9 | BS-Seq | PGC | E13.5 | female | Hisato Kobayashi et al. | DRA000607 | DownLoad |
Kobayashi_DRA000607_BSSeq_E13.5_PGCmale_mm9 | BS-Seq | PGC | E13.5 | male | Hisato Kobayashi et al. | DRA000607 | DownLoad |
Beerman_GSE44117_RRBS_E14.5_HSC_FetalLiver_mm9 | RRBS | HSC FetalLiver | E14.5 | male | Isabel Beerman et al. | GSE44117 | DownLoad |
Meissner_GSE11034_RRBS_E14.5_NPC_mm9 | RRBS | NPC | E14.5 | male | Alexander Meissner et al. | GSE11034 | DownLoad |
Stadler_GSE30202_BSSeq_E14.5_NPC_mm9 | BS-Seq | NPC | E14.5 | unknown | Michael B. Stadler et al. | GSE30202 | DownLoad |
Kobayashi_DRA000607_BSSeq_E16.5_PGCfemale_mm9 | BS-Seq | PGC | E16.5 | female | Hisato Kobayashi et al. | DRA000607 | DownLoad |
Kobayashi_DRA000607_BSSeq_E16.5_PGCmale_mm9 | BS-Seq | PGC | E16.5 | male | Hisato Kobayashi et al. | DRA000607 | DownLoad |
Beerman_GSE44117_RRBS_M3.5_HSC_BoneMarrow_mm9 | RRBS | HSC BoneMarrow | M3.5 | male | Isabel Beerman et al. | GSE44117 | DownLoad |
Beerman_GSE44117_RRBS_M25_HSC_BoneMarrow_mm9 | RRBS | HSC BoneMarrow | M25 | male | Isabel Beerman et al. | GSE44117 | DownLoad |
Meissner_GSE11034_RRBS_Adult_Astrocyte_mm9 | RRBS | Astrocyte | Adult | male | Alexander Meissner et al. | GSE11034 | DownLoad |
Meissner_GSE11034_RRBS_Adult_Bcell_mm9 | RRBS | Bcell | Adult | male | Alexander Meissner et al. | GSE11034 | DownLoad |
Meissner_GSE11034_RRBS_Adult_Brain_mm9 | RRBS | Brain | Adult | male | Alexander Meissner et al. | GSE11034 | DownLoad |
Meissner_GSE11034_RRBS_Adult_CD4Tcell_mm9 | RRBS | CD4Tcell | Adult | male | Alexander Meissner et al. | GSE11034 | DownLoad |
Meissner_GSE11034_RRBS_Adult_CD8Tcell_mm9 | RRBS | CD8Tcell | Adult | male | Alexander Meissner et al. | GSE11034 | DownLoad |
Meissner_GSE11034_RRBS_Adult_Fibroblast_mm9 | RRBS | Fibroblast | Adult | male | Alexander Meissner et al. | GSE11034 | DownLoad |
Meissner_GSE11034_RRBS_Adult_Liver_mm9 | RRBS | Liver | Adult | male | Alexander Meissner et al. | GSE11034 | DownLoad |
Meissner_GSE11034_RRBS_Adult_Lung_mm9 | RRBS | Lung | Adult | male | Alexander Meissner et al. | GSE11034 | DownLoad |
Meissner_GSE11034_RRBS_Adult_Spleen_mm9 | RRBS | Spleen | Adult | male | Alexander Meissner et al. | GSE11034 | DownLoad |
Smith_GSE34864_RRBS_Adult_Brain_mm9 | RRBS | Brain | Adult | unknown | Zachary D. Smith et al. | GSE34864 | DownLoad |
Smith_GSE34864_RRBS_Adult_Heart_mm9 | RRBS | Heart | Adult | unknown | Zachary D. Smith et al. | GSE34864 | DownLoad |
Smith_GSE34864_RRBS_Adult_Liver_mm9 | RRBS | Liver | Adult | unknown | Zachary D. Smith et al. | GSE34864 | DownLoad |
Smith_GSE34864_RRBS_Adult_Oocytes_mm9 | RRBS | Oocytes | Adult | female | Zachary D. Smith et al. | GSE34864 | DownLoad |
Smith_GSE34864_RRBS_Adult_Sperm_mm9 | RRBS | Sperm | Adult | male | Zachary D. Smith et al. | GSE34864 | DownLoad |
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